Visual Neuroscience Lab
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MRI: from DICOM to GLM Analysis
01 - DICOM to BIDS
02 - T1w for PBn
03 - Defacing
04 - Removing Noise Scan
05 - fmriprep
Troubleshooting
MRI
3D printing a brain
7T anatomical analysis on neurodesk
MRI BIDS and OSF
fMRIprep analysis
Old MRI setup
Update to the MRI lab setup
Physiological noise correction
Behavioral
Vision tests
BIDS for behavioral studies
Custom-built chin rests
People
Stipends and prizes for master students
Coffee time
Participant compensation
Things to do if you are leaving the lab
Scientific writing in practice
Other Topics
Calculating a priori sample size using G Power
Gamma correction
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MRI
3D printing a brain
MRI
3D-Print
current procedure for 3d printing brains
NZ
Oct 10, 2024
7T anatomical analysis on neurodesk
MRI
7T
Analysis
Neurodesk
How to run 7 Tesla anatomy analysis on neurodesk
AC
Jan 27, 2025
MRI BIDS and OSF
BIDS
OSF
Information about BIDS and OSF
AA
May 23, 2024
Dicom to Bids conversion
DICOM
BIDS
MRI
Neurodesk
how to convert from dicom’s to bids
AC
Aug 12, 2024
fMRIprep analysis
MRI
Analysis
Neurodesk
fmriPrep
Information about using fMRIprep to preprocess fMRI data
AC
Jul 8, 2024
FreeSurfer FSFAST
MRI
Analysis
Neurodesk
Information about running an FSFAST analysis on Neurodesk
AC
Jan 16, 2025
Old MRI setup
MRI
Information about running experiments in the MRI lab (before the new computer arrived!)
AA
Jan 1, 2023
Update to the MRI lab setup
MRI
NNL-Goggles
The MRI lab has had some upgrades in 2024 including:
AC
Oct 7, 2024
Physiological noise correction
MRI
Physiology
Creating physiology regressors using the PhysIO toolbox
MW
Oct 26, 2023
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