Visual Neuroscience Lab
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MRI: from DICOM to GLM Analysis
00 - Overview
01 - DICOM to BIDS
02 - Check IntendedFor field of the fmap’s JSON
03 - T1w for PBn
04 - Defacing
05 - Removing Noise Scan
06 - fMRIprep
07 - Retinotopic Mapping
08 - first level GLM
09- second level GLM
Troubleshooting
MRI
MRI-Studies: General Information
3D printing a brain
7T anatomical analysis on neurodesk
MRI BIDS and OSF
fMRIprep analysis
MNI space
Old MRI setup
Update to the MRI lab setup
Physiological noise correction
Behavioral
Vision tests
BIDS for behavioral studies
Custom-built chin rests
People
Stipends and prizes for master and PhD students
Coffee time
Participant compensation
Things to do if you are leaving the lab
Scientific writing in practice
Research funding opportunities
Internship
Pflichtpraktikum
Internship Checklist
internship/claustrum_segmentation.qmd
Other Topics
Calculating a priori sample size using G Power
Gamma correction
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Older ways to access the server
Labmeeting
Archive
Internship project list
Internship
Lab
This is a list of all completed internship projects with links to the corresponding presentations/reports/materials
Author
NZ, MG
Published
August 4, 2025
Year/Month
Title
2025/08
FIR modelling of the hemodynamic response in the human claustrum
2025/07
Optimal parameters for the first-level GLM analysis in Nilearn
2025/07
Visual comparison of different claustrum segmentation methods
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